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Intron Name: Anas_platyrhynchos_platyrhynchos_3_12500618_12502655_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

12500618 - 12502655

Intron Length:

2038

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTTTCTTAG

5'SS Class:

weak_major

3'SS Sequence:

AGCTTCTTCCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTGCAT

U12 Branch Point Sequence:

CTTCTCCCAGCT

Flanking Amino Acid:

FPGMAVLSSGLQCACFQKLS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

51.9

0.05

1.3

50.6

42.8

Major BPS

59.8

0.25

1.5

71.4

45.1

Major PPT

74.2

0.55

0.9

65.4

40.5

Minor 5ss

47.1

-0.3

2.2

50.4

46.2

Minor BPS

44.4

-0.3

66.26

44.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021989

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047612

12500513 - 12502820

2308