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Intron Name: Anas_platyrhynchos_platyrhynchos_3_12506386_12506525_F


Intron Information:

Intron Rank:
7

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
12506386 - 12506525

Intron Length:
140

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GAG|GTAAGTCTG

5'SS Class:
strong_major

3'SS Sequence:
TTTGGCTTTTCAG|A

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
ATTTCAG

U12 Branch Point Sequence:
GAGCCCTGCATT

Flanking Amino Acid:
TNLVRRLCERETPPDALILE

Intron Amino Acid Position:
247

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
94.8
1.06
0.8
81.8
38.5

Major BPS
67.2
0.43
1.5
77.4
37.3

Major PPT
84.3
0.77
0.8
81
36.6

Minor 5ss
37.8
-1.4
3
49.5
46.7

Minor BPS
46.4
-0.2
1.9
60.54
42.8

Associated Gene:

Gene:
ABHD12

Ensembl Gene ID:

Chromosome:
3

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

12474942 - 12508690
33749