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Intron Name: Anas_platyrhynchos_platyrhynchos_3_12506942_12507729_F


Intron Information:

Intron Rank:
9

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
12506942 - 12507729

Intron Length:
788

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GAA|GTGAGTGTC

5'SS Class:
strong_major

3'SS Sequence:
TAGTTTTGGGCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
ACATCAG

U12 Branch Point Sequence:
GTGTGTAGGAGT

Flanking Amino Acid:
TSGIKFANDEKEENASSLPA

Intron Amino Acid Position:
301

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
82.5
0.77
0.9
78.5
28.9

Major BPS
47.2
-0.1
1.5
53.7
41.6

Major PPT
67.7
0.4
1.1
65.5
45.1

Minor 5ss
33.5
-1.9
3.3
43.7
38.1

Minor BPS
36.9
-0.9
2.1
52.89
42.5

Associated Gene:

Gene:
ABHD12

Ensembl Gene ID:

Chromosome:
3

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

12474942 - 12508690
33749