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Intron Name: Anas_platyrhynchos_platyrhynchos_3_12508307_12508650_F


Intron Information:

Intron Rank:
11

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
12508307 - 12508650

Intron Length:
344

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GCG|GTAACAGCC

5'SS Class:
major

3'SS Sequence:
TTTCTTTTCCTAG|G

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
AACTGAG

U12 Branch Point Sequence:
GTTTCTTTTCCT

Flanking Amino Acid:
YRSPELPRILREFLGVSEHE

Intron Amino Acid Position:
388

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
67.3
0.41
1.2
58.2
39.8

Major BPS
50.8
0.02
1.4
49.1
38

Major PPT
86
0.81
0.6
80.7
31.3

Minor 5ss
37.7
-1.4
3.4
52.5
44.3

Minor BPS
45.7
-0.2
3.6
80.6
41.3

Associated Gene:

Gene:
ABHD12

Ensembl Gene ID:

Chromosome:
3

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

12474942 - 12508690
33749