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Intron Name: Anas_platyrhynchos_platyrhynchos_3_12511909_12512120_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12511909 - 12512120

Intron Length:

212

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGAGCT

5'SS Class:

strong_major

3'SS Sequence:

CCCCTCTTCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACGTGAC

U12 Branch Point Sequence:

CCCTACGTGACT

Flanking Amino Acid:

CQGQVDQLFMDPREWTKKVI

Intron Amino Acid Position:

794

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.7

0.8

0.9

74.3

34.1

Major BPS

1.2

42.7

39.5

Major PPT

75.8

0.58

0.8

67.6

32.3

Minor 5ss

33.2

-1.9

3.4

45.7

43.4

Minor BPS

46.6

-0.1

2.2

63.42

47.1

Associated Gene:

Gene:

PYGB

Ensembl Gene ID:

ENSAPLG00000010355

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010898

12511756 - 12525274

13519