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Intron Name: Anas_platyrhynchos_platyrhynchos_3_12516885_12517502_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12516885 - 12517502

Intron Length:

618

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGT|GTAAGTGCT

5'SS Class:

major

3'SS Sequence:

TCTCTCACTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCTCAC

U12 Branch Point Sequence:

TTCTCTCTCACT

Flanking Amino Acid:

KAPNDFNLQEFNVGDYIEAV

Intron Amino Acid Position:

258

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.9

0.59

1.1

71.8

38.2

Major BPS

72.7

0.56

30.1

Major PPT

80.2

0.68

0.8

74.2

29.3

Minor 5ss

37.3

-1.4

3.3

51.5

44.9

Minor BPS

0.27

2.1

80.09

42.2

Associated Gene:

Gene:

PYGB

Ensembl Gene ID:

ENSAPLG00000010355

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010898

12511756 - 12525274

13519