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Intron Name: Anas_platyrhynchos_platyrhynchos_3_12520701_12521634_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12520701 - 12521634

Intron Length:

934

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACACGG

5'SS Class:

major

3'SS Sequence:

TCTGCTCTTCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGATCAT

U12 Branch Point Sequence:

GCAGTGTGATCA

Flanking Amino Acid:

LGNGGLGRLAACFLDSMATL

Intron Amino Acid Position:

142

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.6

0.56

1.2

57.3

47.4

Major BPS

0.57

1.2

41.2

Major PPT

0.72

0.8

73.1

37.3

Minor 5ss

36.9

-1.5

3.1

48.4

47.1

Minor BPS

36.6

-1

2.1

40.84

39.7

Associated Gene:

Gene:

PYGB

Ensembl Gene ID:

ENSAPLG00000010355

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010898

12511756 - 12525274

13519