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Intron Name: Anas_platyrhynchos_platyrhynchos_3_12521714_12523298_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12521714 - 12523298

Intron Length:

1585

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAAGTCC

5'SS Class:

major

3'SS Sequence:

GTTTCCCCAACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTGAC

U12 Branch Point Sequence:

GTTTCCCCAACA

Flanking Amino Acid:

QNACDEAIYQLGLDLEELEE

Intron Amino Acid Position:

116

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.8

0.61

65.9

34.2

Major BPS

66.3

0.4

1.1

41.8

Major PPT

72.7

0.51

0.9

34.1

Minor 5ss

31.9

-2.1

3.3

41.8

45.1

Minor BPS

62.4

0.39

1.9

77.87

38.2

Associated Gene:

Gene:

PYGB

Ensembl Gene ID:

ENSAPLG00000010355

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010898

12511756 - 12525274

13519