Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_12532009_12532593_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12532009 - 12532593

Intron Length:

585

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTAGTTGT

5'SS Class:

strong_major

3'SS Sequence:

TTTCCCTTTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTCAC

U12 Branch Point Sequence:

TTGTTGTTCACA

Flanking Amino Acid:

FNSTYKLYSYSYLGLGLMSA

Intron Amino Acid Position:

242

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.1

0.8

1.1

79.9

Major BPS

74.9

0.62

1.1

77.4

37.4

Major PPT

89.5

0.89

0.6

84.5

23.1

Minor 5ss

38.3

-1.3

2.8

50.9

45.4

Minor BPS

49.4

-0

2.4

70.13

42.8

Associated Gene:

Gene:

ENTPD6

Ensembl Gene ID:

ENSAPLG00000013990

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014620

12531804 - 12540688

8885