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Intron Name: Anas_platyrhynchos_platyrhynchos_3_12576543_12577274_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

12576543 - 12577274

Intron Length:

732

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTGAGCCAC

5'SS Class:

major

3'SS Sequence:

TTGTTTCTTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAG

U12 Branch Point Sequence:

AGTGTTGAAACT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.3

0.57

59.7

41.3

Major BPS

0.65

1.5

85.7

34.9

Major PPT

85.2

0.79

0.7

81.6

30.5

Minor 5ss

33.2

-1.9

3.1

42.7

44.4

Minor BPS

42.9

-0.4

2.2

61.63

Associated Gene:

Gene:

PEX6

Ensembl Gene ID:

ENSAPLG00000014569

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042386

12576379 - 12589929

13551

ENSAPLT00000015228

12576379 - 12590082

13704