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Intron Name: Anas_platyrhynchos_platyrhynchos_3_12578549_12581276_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12578549 - 12581276

Intron Length:

2728

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATTCCT

5'SS Class:

strong_major

3'SS Sequence:

GCCTGTCTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTGCAG

U12 Branch Point Sequence:

AGCCCCTGCAGT

Flanking Amino Acid:

CSCLNLHLFKVDCVSLCGDT

Intron Amino Acid Position:

105

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.83

0.9

77.3

37.6

Major BPS

43.4

-0.4

1.8

57.1

49.4

Major PPT

75.6

0.58

0.9

68.5

37.3

Minor 5ss

36.9

-1.5

2.9

51.8

44.6

Minor BPS

-0.4

2.1

57.49

44.8

Associated Gene:

Gene:

PEX6

Ensembl Gene ID:

ENSAPLG00000014569

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042386

12576379 - 12589929

13551

ENSAPLT00000015228

12576379 - 12590082

13704