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Intron Name: Anas_platyrhynchos_platyrhynchos_3_12581486_12582079_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12581486 - 12582079

Intron Length:

594

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGTTGG

5'SS Class:

strong_major

3'SS Sequence:

CCTTTCTCAACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CATTCAC

U12 Branch Point Sequence:

CCTTTCTCAACA

Flanking Amino Acid:

QLLLDRDPALSHPVLVIGTT

Intron Amino Acid Position:

174

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

1.04

0.8

78.8

38.3

Major BPS

69.9

0.5

31.5

Major PPT

77.4

0.62

0.8

73.3

30.3

Minor 5ss

39.6

-1.2

2.8

49.7

46.6

Minor BPS

64.9

0.46

1.6

70.77

41.8

Associated Gene:

Gene:

PEX6

Ensembl Gene ID:

ENSAPLG00000014569

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042386

12576379 - 12589929

13551

ENSAPLT00000015228

12576379 - 12590082

13704