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Intron Name: Anas_platyrhynchos_platyrhynchos_3_12582273_12582631_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12582273 - 12582631

Intron Length:

359

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCA|GTGAGTGAA

5'SS Class:

major

3'SS Sequence:

TCCGCGTTCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AACTGAT

U12 Branch Point Sequence:

CTGGACTGAACT

Flanking Amino Acid:

NLAKLARRTAGFVLGDFCAL

Intron Amino Acid Position:

239

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.6

0.53

67.8

32.7

Major BPS

74.7

0.61

0.9

63.4

35.6

Major PPT

70.4

0.46

0.9

63.3

37.1

Minor 5ss

28.7

-2.4

3.1

36.5

41.7

Minor BPS

0.14

1.8

69.63

46.8

Associated Gene:

Gene:

PEX6

Ensembl Gene ID:

ENSAPLG00000014569

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042386

12576379 - 12589929

13551

ENSAPLT00000015228

12576379 - 12590082

13704