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Intron Name: Anas_platyrhynchos_platyrhynchos_3_12582709_12582815_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

12582709 - 12582815

Intron Length:

107

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGCCTGG

5'SS Class:

weak_major

3'SS Sequence:

CTTTCCTTGCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCCTGAG

U12 Branch Point Sequence:

AGTGCCTGAGCC

Flanking Amino Acid:

RAACTRIQALSFPGGLSEEV

Intron Amino Acid Position:

264

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

63.8

0.33

1.3

51.5

47.9

Major BPS

44.9

-0.3

1.6

42.9

Major PPT

78.7

0.65

0.9

72.9

37.4

Minor 5ss

47.4

-0.3

64.5

46.9

Minor BPS

50.1

-0

1.8

62.85

42.1

Associated Gene:

Gene:

PEX6

Ensembl Gene ID:

ENSAPLG00000014569

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042386

12576379 - 12589929

13551

ENSAPLT00000015228

12576379 - 12590082

13704