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Intron Name: Anas_platyrhynchos_platyrhynchos_3_12582949_12585053_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12582949 - 12585053

Intron Length:

2105

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGATGC

5'SS Class:

strong_major

3'SS Sequence:

CCCTCTCGTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTGAC

U12 Branch Point Sequence:

CTGACGGGGACT

Flanking Amino Acid:

AHSQAVGAPKIPSVSWQDVG

Intron Amino Acid Position:

309

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.2

0.71

66.9

Major BPS

66.3

0.4

1.1

41.8

Major PPT

73.4

0.53

0.9

68.1

Minor 5ss

36.9

-1.5

3.3

50.4

46.2

Minor BPS

37.4

-0.9

2.6

56.03

46.4

Associated Gene:

Gene:

PEX6

Ensembl Gene ID:

ENSAPLG00000014569

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042386

12576379 - 12589929

13551

ENSAPLT00000015228

12576379 - 12590082

13704