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Intron Name: Anas_platyrhynchos_platyrhynchos_3_12595928_12596039_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12595928 - 12596039

Intron Length:

112

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGA|GTAAGTCTT

5'SS Class:

major

3'SS Sequence:

CTTCTCTCCCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCCTCAG

U12 Branch Point Sequence:

TTCTCCCTCAGG

Flanking Amino Acid:

ADHVLKGKDASCLAEKWTGK

Intron Amino Acid Position:

540

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.4

0.65

75.5

40.6

Major BPS

48.4

-0.1

1.5

56.9

40.5

Major PPT

80.7

0.69

0.7

31.8

Minor 5ss

41.4

-1

3.1

55.9

42.3

Minor BPS

46.3

-0.4

2.4

59.61

47.9

Associated Gene:

Gene:

CNPY3

Ensembl Gene ID:

ENSAPLG00000017921

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043826

12594716 - 12599589

4874