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Intron Name: Anas_platyrhynchos_platyrhynchos_3_12600216_12600284_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

12600216 - 12600284

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CCG|GCCGGCCCT

5'SS Class:

major

3'SS Sequence:

CACCAGGCGCCAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CTTCCAC

U12 Branch Point Sequence:

TTCCCTTCCACC

Flanking Amino Acid:

RPKKPWESRPAPKELFLFKK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

60.6

0.25

1.3

56.3

42.4

Major BPS

55.1

0.13

1.3

67.8

38.2

Major PPT

49.3

-0

1.1

38.3

39.4

Minor 5ss

24.7

-2.9

4.1

40.7

45.1

Minor BPS

48.7

-0.1

63.67

42.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019490

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036958

12600002 - 12600892

891