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Intron Name: Anas_platyrhynchos_platyrhynchos_3_12613960_12614882_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12613960 - 12614882

Intron Length:

923

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAATGAGG

5'SS Class:

major

3'SS Sequence:

TTTTTTCTGGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAA

U12 Branch Point Sequence:

CGAGCATTATTC

Flanking Amino Acid:

ELIQRHEEEEEMGGYFIING

Intron Amino Acid Position:

159

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.2

0.67

66.2

44.9

Major BPS

87.3

0.93

0.8

36.5

Major PPT

86.5

0.82

0.9

84.9

29.9

Minor 5ss

31.7

-2.1

3.1

40.2

45.5

Minor BPS

44.1

-0.4

1.9

48.84

41.3

Associated Gene:

Gene:

POLR1B

Ensembl Gene ID:

ENSAPLG00000004142

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004271

12600271 - 12616845

16575