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Intron Name: Anas_platyrhynchos_platyrhynchos_3_12629411_12632688_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12629411 - 12632688

Intron Length:

3278

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGGGCT

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTGTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAA

U12 Branch Point Sequence:

TTTGCCTGACTT

Flanking Amino Acid:

ERNRLPFGRLGHEPGLVQLV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.6

0.72

71.1

37.9

Major BPS

90.8

1.01

0.7

91.9

19.6

Major PPT

0.88

0.8

84.5

30.4

Minor 5ss

31.4

-2.1

3.6

39.6

45.9

Minor BPS

58.8

0.35

1.9

80.5

41.8

Associated Gene:

Gene:

TTL

Ensembl Gene ID:

ENSAPLG00000004001

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004099

12622112 - 12632845

10734