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Intron Name: Anas_platyrhynchos_platyrhynchos_3_12644921_12649739_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12644921 - 12649739

Intron Length:

4819

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTTGACCC

5'SS Class:

major

3'SS Sequence:

GTGCTTGCGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTCCAT

U12 Branch Point Sequence:

CATCCCGTAAGT

Flanking Amino Acid:

GAVVFGYLSDRFGRKSMLML

Intron Amino Acid Position:

161

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.5

0.44

1.2

57.3

Major BPS

77.3

0.68

1.2

86.7

32.3

Major PPT

62.3

0.28

1.1

57.8

43.2

Minor 5ss

35.7

-1.6

2.8

44.1

43.2

Minor BPS

48.8

-0

2.3

70.36

46.2

Associated Gene:

Gene:

SLC22A7

Ensembl Gene ID:

ENSAPLG00000003838

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043203

12632952 - 12652915

19964

ENSAPLT00000003931

12636721 - 12652915

16195