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Intron Name: Anas_platyrhynchos_platyrhynchos_3_12705783_12708264_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12705783 - 12708264

Intron Length:

2482

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGA|GTGAGTATT

5'SS Class:

major

3'SS Sequence:

CTCTTTTCTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCCTCAG

U12 Branch Point Sequence:

TGCTCCTCAGTC

Flanking Amino Acid:

YASVNAHKNREMGRHDDLWS

Intron Amino Acid Position:

233

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.8

0.61

80.7

33.7

Major BPS

58.4

0.21

1.5

67.6

40.6

Major PPT

87.4

0.84

0.7

80.3

31.8

Minor 5ss

37.5

-1.4

47.9

41.8

Minor BPS

52.6

0.06

1.8

63.43

42.3

Associated Gene:

Gene:

TTBK1

Ensembl Gene ID:

ENSAPLG00000003737

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025372

12682168 - 12750611

68444

ENSAPLT00000003830

12663577 - 12749391

85815

ENSAPLT00000047078

12683100 - 12750207

67108

ENSAPLT00000036179

12663577 - 12760216

96640