Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_12768981_12781166_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12768981 - 12781166

Intron Length:

12186

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACGGCAC

5'SS Class:

major

3'SS Sequence:

TCTGTGCCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACCTGAC

U12 Branch Point Sequence:

TGTGCAGTCACC

Flanking Amino Acid:

EPGTAVHVTYRELLELTCRL

Intron Amino Acid Position:

150

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.6

0.68

64.1

42.1

Major BPS

60.1

0.25

35.6

Major PPT

76.6

0.6

0.9

69.6

36.8

Minor 5ss

-2.3

3.4

45.6

Minor BPS

42.1

-0.6

2.6

59.92

Associated Gene:

Gene:

ACSS1

Ensembl Gene ID:

ENSAPLG00000003258

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003357

12765621 - 12799803

34183