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Intron Name: Anas_platyrhynchos_platyrhynchos_3_1277861_1277948_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1277861 - 1277948

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGTCTC

5'SS Class:

strong_major

3'SS Sequence:

GCCTGTCCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CGTTAAA

U12 Branch Point Sequence:

GCGGCGTTAAAG

Flanking Amino Acid:

RVADRLLDIPRTFPLALDLG

Intron Amino Acid Position:

120

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.6

0.74

72.2

39.5

Major BPS

62.8

0.32

1.2

65.3

38.6

Major PPT

67.4

0.39

0.9

57.5

38.6

Minor 5ss

31.9

-2.1

3.2

43.3

44.4

Minor BPS

43.8

-0.6

2.2

44.75

47.1

Associated Gene:

Gene:

NDUFAF5

Ensembl Gene ID:

ENSAPLG00000012410

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012918

1277414 - 1283942

6529