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Intron Name: Anas_platyrhynchos_platyrhynchos_3_1278013_1279762_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1278013 - 1279762

Intron Length:

1750

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACTGGCG

5'SS Class:

major

3'SS Sequence:

TATTTTATTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTTAT

U12 Branch Point Sequence:

AGTTTCTTATTT

Flanking Amino Acid:

RGYIAQHLTKEIVEKLVQVD

Intron Amino Acid Position:

142

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

67.8

0.42

1.1

54.4

42.9

Major BPS

91.4

1.03

0.7

79.9

34.9

Major PPT

87.9

0.85

0.8

32.7

Minor 5ss

28.5

-2.5

3.6

39.1

46.2

Minor BPS

65.4

0.56

1.5

78.63

37.8

Associated Gene:

Gene:

NDUFAF5

Ensembl Gene ID:

ENSAPLG00000012410

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012918

1277414 - 1283942

6529