Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_12793315_12794236_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12793315 - 12794236

Intron Length:

922

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTGAGTAGA

5'SS Class:

strong_major

3'SS Sequence:

CTCGAATCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGATCAT

U12 Branch Point Sequence:

TTTGCTCGAATC

Flanking Amino Acid:

GIFPVLMDEKGKVVKGNDVS

Intron Amino Acid Position:

491

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.8

0.75

0.9

76.9

33.7

Major BPS

0.57

1.2

41.2

Major PPT

69.9

0.45

0.9

38.6

Minor 5ss

31.4

-2.1

2.7

33.6

35.4

Minor BPS

49.8

-0

1.9

67.61

38.4

Associated Gene:

Gene:

ACSS1

Ensembl Gene ID:

ENSAPLG00000003258

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003357

12765621 - 12799803

34183