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Intron Name: Anas_platyrhynchos_platyrhynchos_3_12803846_12806663_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12803846 - 12806663

Intron Length:

2818

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGGCTG

5'SS Class:

major

3'SS Sequence:

CTGTTCTTGGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTAAT

U12 Branch Point Sequence:

TTAATCTTATTT

Flanking Amino Acid:

DSPAQEAKEGSTYSSKVFRV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.3

0.57

1.1

60.4

45.8

Major BPS

84.4

0.85

34.5

Major PPT

75.7

0.58

72.8

37.5

Minor 5ss

27.5

-2.6

3.5

37.1

47.5

Minor BPS

61.2

0.43

1.6

77.13

39.6

Associated Gene:

Gene:

APMAP

Ensembl Gene ID:

ENSAPLG00000003059

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003113

12803754 - 12815802

12049