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Intron Name: Anas_platyrhynchos_platyrhynchos_3_12812003_12813224_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12812003 - 12813224

Intron Length:

1222

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGACTT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTAAACCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTTTTTAAAC

Flanking Amino Acid:

YGLYEVNPGTGETKMLVSTK

Intron Amino Acid Position:

179

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.2

0.81

0.9

77.2

37.7

Major BPS

96.5

1.15

0.6

34.2

Major PPT

77.2

0.61

72.3

41.6

Minor 5ss

-0.7

3.1

65.1

46.1

Minor BPS

76.4

0.81

1.2

82.98

29.8

Associated Gene:

Gene:

APMAP

Ensembl Gene ID:

ENSAPLG00000003059

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003113

12803754 - 12815802

12049