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Intron Name: Anas_platyrhynchos_platyrhynchos_3_12854154_12891455_F

Intron Information:

Intron Rank:

134906

Intron Class:

major

Intron Phase:

Intron Coordinates:

12854154 - 12891455

Intron Length:

37302

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGTATG

5'SS Class:

strong_major

3'SS Sequence:

CTCTTGTCCTAAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTCAT

U12 Branch Point Sequence:

TTCTTGTCATCC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.6

0.89

0.9

81.8

38.5

Major BPS

84.8

0.86

1.1

85.7

34.9

Major PPT

66.8

0.38

70.9

33.7

Minor 5ss

-1.4

3.1

50.1

46.4

Minor BPS

44.7

-0.4

2.4

61.59

44.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022570

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024660

12853611 - 12896359

42749