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Intron Name: Anas_platyrhynchos_platyrhynchos_3_12854154_12895910_F

Intron Information:

Intron Rank:

134909

Intron Class:

major

Intron Phase:

Intron Coordinates:

12854154 - 12895910

Intron Length:

41757

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGTATG

5'SS Class:

strong_major

3'SS Sequence:

CATGTCTCCACAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATGCAT

U12 Branch Point Sequence:

GTTTCTTGCATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.6

0.89

0.9

81.8

38.5

Major BPS

67.2

0.43

1.4

77.7

37.1

Major PPT

0.5

0.9

64.9

36.1

Minor 5ss

-1.4

3.1

50.1

46.4

Minor BPS

55.1

0.24

1.9

77.3

39.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022570

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029374

12854082 - 12895928

41847