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Intron Name: Anas_platyrhynchos_platyrhynchos_3_12964504_12966298_F

Intron Information:

Intron Rank:

144989

Intron Class:

major

Intron Phase:

Intron Coordinates:

12964504 - 12966298

Intron Length:

1795

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTAAGGCTG

5'SS Class:

major

3'SS Sequence:

TTCTGTCTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTCCAAT

U12 Branch Point Sequence:

GGATCGTTGAGT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.8

0.68

1.1

64.3

47.1

Major BPS

54.1

0.1

1.4

64.7

Major PPT

86.9

0.83

0.7

84.6

30.4

Minor 5ss

33.9

-1.8

3.4

39.3

Minor BPS

47.1

-0.1

2.3

65.43

44.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028175

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018754

12963021 - 12966373

3353