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Intron Name: Anas_platyrhynchos_platyrhynchos_3_13084084_13084455_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13084084 - 13084455

Intron Length:

372

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGTGCC

5'SS Class:

strong_major

3'SS Sequence:

TGTCTTGTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTAAA

U12 Branch Point Sequence:

TTGCAATTAAAG

Flanking Amino Acid:

VVRVISAKRQLVSGIKYTIE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

71.2

34.2

Major BPS

73.8

0.59

0.9

26.8

Major PPT

0.72

0.9

76.5

37.5

Minor 5ss

27.1

-2.6

3.2

41.6

Minor BPS

47.6

-0.3

1.9

56.93

43.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002886

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047371

13082792 - 13084683

1892

ENSAPLT00000002925

13082767 - 13084683

1917