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Intron Name: Anas_platyrhynchos_platyrhynchos_3_13129604_13129847_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13129604 - 13129847

Intron Length:

244

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGGGTGCC

5'SS Class:

strong_major

3'SS Sequence:

GTCCCCCTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTAAA

U12 Branch Point Sequence:

GCGTTGTTAAAG

Flanking Amino Acid:

RQKLVQELEEAQSSARSLQA

Intron Amino Acid Position:

876

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

71.2

34.2

Major BPS

75.2

0.63

1.1

75.9

36.3

Major PPT

76.3

0.59

0.8

69.1

31.4

Minor 5ss

27.1

-2.6

3.2

41.6

Minor BPS

45.8

-0.4

2.2

48.4

45.1

Associated Gene:

Gene:

RRBP1

Ensembl Gene ID:

ENSAPLG00000000581

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000000987

13128752 - 13143357

14606