Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_13132398_13133164_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13132398 - 13133164

Intron Length:

767

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGGGTGTG

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTGGCTTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTTATTATTT

Flanking Amino Acid:

LTVSEEELQKSQLQLKSLED

Intron Amino Acid Position:

764

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.8

0.75

72.2

39.5

Major BPS

96.5

1.15

0.6

34.2

Major PPT

76.4

0.59

0.9

77.1

37.1

Minor 5ss

29.5

-2.4

3.4

39.1

46.7

Minor BPS

62.5

0.47

1.8

84.55

36.3

Associated Gene:

Gene:

RRBP1

Ensembl Gene ID:

ENSAPLG00000000581

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000000987

13128752 - 13143357

14606