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Intron Name: Anas_platyrhynchos_platyrhynchos_3_13135377_13136030_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13135377 - 13136030

Intron Length:

654

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGTCTC

5'SS Class:

strong_major

3'SS Sequence:

CGTGTCGTTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGCTCAC

U12 Branch Point Sequence:

GGAAGCTCACCC

Flanking Amino Acid:

NEAELKQTQLRLQEKTDQLS

Intron Amino Acid Position:

583

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.9

0.85

76.2

39.9

Major BPS

0.28

1.1

63.1

35.8

Major PPT

71.7

0.49

61.4

44.6

Minor 5ss

37.4

-1.4

3.3

52.4

44.8

Minor BPS

40.3

-0.7

2.1

46.15

41.9

Associated Gene:

Gene:

RRBP1

Ensembl Gene ID:

ENSAPLG00000000581

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000000987

13128752 - 13143357

14606