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Intron Name: Anas_platyrhynchos_platyrhynchos_3_13136069_13136216_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

13136069 - 13136216

Intron Length:

148

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCCTGGGC

5'SS Class:

weak_major

3'SS Sequence:

TTCTGTCTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAGTGAT

U12 Branch Point Sequence:

TGGCCCAGGACA

Flanking Amino Acid:

REAEKDRDLQAANEAELKQT

Intron Amino Acid Position:

571

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

53.1

0.07

1.4

49.9

40.7

Major BPS

64.7

0.36

1.2

55.1

42.1

Major PPT

85.1

0.79

0.8

76.9

37.4

Minor 5ss

-3

3.4

33.6

41.7

Minor BPS

47.2

-0.2

1.8

58.98

Associated Gene:

Gene:

RRBP1

Ensembl Gene ID:

ENSAPLG00000000581

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000000987

13128752 - 13143357

14606