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Intron Name: Anas_platyrhynchos_platyrhynchos_3_13139079_13139784_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13139079 - 13139784

Intron Length:

706

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGATCA

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTGCTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CAATAAC

U12 Branch Point Sequence:

GCTGCAATAACC

Flanking Amino Acid:

LNQATSQTESKQNAELAKLR

Intron Amino Acid Position:

410

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.2

0.74

0.9

74.2

30.2

Major BPS

57.8

0.19

1.1

59.6

32.6

Major PPT

85.1

0.79

0.8

77.5

36.9

Minor 5ss

39.9

-1.1

49.1

Minor BPS

48.3

-0.1

61.36

43.4

Associated Gene:

Gene:

RRBP1

Ensembl Gene ID:

ENSAPLG00000000581

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000000987

13128752 - 13143357

14606