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Intron Name: Anas_platyrhynchos_platyrhynchos_3_13140368_13140828_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13140368 - 13140828

Intron Length:

461

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGTGCT

5'SS Class:

strong_major

3'SS Sequence:

CCTCTCCTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GACTAAG

U12 Branch Point Sequence:

GCACCGAGGACT

Flanking Amino Acid:

ARNKLRELSKELAAEKAKAV

Intron Amino Acid Position:

320

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.6

0.86

0.9

78.9

33.5

Major BPS

-0.1

1.6

55.6

40.2

Major PPT

82.5

0.73

0.7

76.4

25.6

Minor 5ss

33.9

-1.8

3.5

49.9

46.5

Minor BPS

38.3

-0.8

2.2

52.2

41.9

Associated Gene:

Gene:

RRBP1

Ensembl Gene ID:

ENSAPLG00000000581

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000000987

13128752 - 13143357

14606