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Intron Name: Anas_platyrhynchos_platyrhynchos_3_13186888_13187716_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13186888 - 13187716

Intron Length:

829

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGCAAC

5'SS Class:

strong_major

3'SS Sequence:

CTTCTTCTCCAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCTAAC

U12 Branch Point Sequence:

TAACATTTACTT

Flanking Amino Acid:

LALEEPTVIKKYLLKVAELF

Intron Amino Acid Position:

347

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.4

0.72

75.1

35.1

Major BPS

75.8

0.64

0.9

75.6

25.3

Major PPT

72.3

0.5

71.1

33.5

Minor 5ss

41.4

-1

2.9

52.3

38.8

Minor BPS

48.1

-0

1.7

64.44

39.9

Associated Gene:

Gene:

SNX5

Ensembl Gene ID:

ENSAPLG00000016284

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017006

13183591 - 13197580

13990