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Intron Name: Anas_platyrhynchos_platyrhynchos_3_13200484_13201485_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

13200484 - 13201485

Intron Length:

1002

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGC|GTGAGTTCA

5'SS Class:

major

3'SS Sequence:

TATTTTTCTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTTAT

U12 Branch Point Sequence:

TGACTCTGAAAA

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

65.6

0.37

1.3

64.6

Major BPS

78.7

0.71

1.2

71.7

44.6

Major PPT

89.5

0.89

0.7

84.5

30.1

Minor 5ss

-1.6

2.7

37.1

40.4

Minor BPS

51.1

0.03

1.5

61.08

37.8

Associated Gene:

Gene:

MGME1

Ensembl Gene ID:

ENSAPLG00000016203

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021179

13200132 - 13204748

4617