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Intron Name: Anas_platyrhynchos_platyrhynchos_3_13247025_13247139_F


Intron Information:

Intron Rank:
12

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
13247025 - 13247139

Intron Length:
115

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GCT|GTGAGGAGC

5'SS Class:
major

3'SS Sequence:
TGTTGTGTTGTAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
CTGGCAG

U12 Branch Point Sequence:
GGTTCCTGCTGT

Flanking Amino Acid:
LEGWEPDDDPLEEHKKHSAG

Intron Amino Acid Position:
687

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
64
0.33
1.1
57.2
41.8

Major BPS
39.6
-0.6
1.7
46.5
47

Major PPT
75.1
0.56
1
69.5
41.6

Minor 5ss
30.1
-2.3
3.2
43.9
43.7

Minor BPS
34.9
-1
3.6
62.38
47

Associated Gene:

Gene:
KAT14

Ensembl Gene ID:

Chromosome:
3

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

13226536 - 13248593
22058