Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_13258746_13259336_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13258746 - 13259336

Intron Length:

591

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGACAC

5'SS Class:

strong_major

3'SS Sequence:

CACTCTCCCACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTTAC

U12 Branch Point Sequence:

GTTACTTACACT

Flanking Amino Acid:

DAGDSLRISETKPLQAQVAW

Intron Amino Acid Position:

434

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.7

0.94

0.8

75.1

35.1

Major BPS

73.7

0.59

0.9

63.6

35.1

Major PPT

71.4

0.48

0.8

64.6

30.6

Minor 5ss

32.3

-2

3.1

41.7

Minor BPS

49.1

0.01

2.1

73.03

Associated Gene:

Gene:

DZANK1

Ensembl Gene ID:

ENSAPLG00000005843

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040709

13248195 - 13269215

21021

ENSAPLT00000006061

13248621 - 13268475

19855