Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_13264921_13265709_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13264921 - 13265709

Intron Length:

789

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGCGGTGT

5'SS Class:

major

3'SS Sequence:

TTTGTAATTTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTAAT

U12 Branch Point Sequence:

AGGTTTGTAATT

Flanking Amino Acid:

AWSEAPQDFQDLETEKKTYH

Intron Amino Acid Position:

159

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.2

0.62

66.7

41.3

Major BPS

84.4

0.85

1.1

34.5

Major PPT

77.9

0.63

0.9

75.5

38.4

Minor 5ss

31.9

-2.1

3.5

46.9

48.5

Minor BPS

49.1

0.01

65.82

39.8

Associated Gene:

Gene:

DZANK1

Ensembl Gene ID:

ENSAPLG00000005843

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040709

13248195 - 13269215

21021

ENSAPLT00000006061

13248621 - 13268475

19855