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Intron Name: Anas_platyrhynchos_platyrhynchos_3_13280828_13281002_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13280828 - 13281002

Intron Length:

175

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGGTGA

5'SS Class:

strong_major

3'SS Sequence:

TCGTTCCTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GCCTCAA

U12 Branch Point Sequence:

CCTGCCTCAACG

Flanking Amino Acid:

PGVSGRGSAESRCSPMATYL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.82

0.9

71.8

36.2

Major BPS

55.4

0.13

1.2

59.5

Major PPT

81.9

0.72

0.8

73.4

37.1

Minor 5ss

30.7

-2.2

3.2

46.8

Minor BPS

55.8

0.04

1.8

59.08

48.4

Associated Gene:

Gene:

SEC23B

Ensembl Gene ID:

ENSAPLG00000004406

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027025

13280477 - 13294874

14398

ENSAPLT00000004619

13280477 - 13295622

15146