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Intron Name: Anas_platyrhynchos_platyrhynchos_3_13282311_13282966_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13282311 - 13282966

Intron Length:

656

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGTTGA

5'SS Class:

strong_major

3'SS Sequence:

TTCTGTTTTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCCTAAT

U12 Branch Point Sequence:

TTGTCCTAATTT

Flanking Amino Acid:

ACNFCFQRNQFPPAYAGISE

Intron Amino Acid Position:

140

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.4

0.88

0.9

76.7

34.9

Major BPS

81.9

0.79

0.9

80.1

Major PPT

89.5

0.89

0.7

87.9

29.5

Minor 5ss

45.7

-0.5

2.5

58.5

Minor BPS

59.5

0.38

1.9

79.35

43.5

Associated Gene:

Gene:

SEC23B

Ensembl Gene ID:

ENSAPLG00000004406

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027025

13280477 - 13294874

14398

ENSAPLT00000004619

13280477 - 13295622

15146