Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_13285457_13286292_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13285457 - 13286292

Intron Length:

836

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAGGTGCT

5'SS Class:

major

3'SS Sequence:

CTGTTCTCCCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTAAA

U12 Branch Point Sequence:

GCATCCTAAAAC

Flanking Amino Acid:

NARFMKKATKHYETLANRTA

Intron Amino Acid Position:

378

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.4

0.62

72.8

35.1

Major BPS

72.7

0.57

72.1

31.1

Major PPT

77.2

0.61

0.8

69.4

36.9

Minor 5ss

35.6

-1.6

3.5

49.9

40.8

Minor BPS

54.2

0.11

1.8

61.34

43.5

Associated Gene:

Gene:

SEC23B

Ensembl Gene ID:

ENSAPLG00000004406

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027025

13280477 - 13294874

14398

ENSAPLT00000004619

13280477 - 13295622

15146