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Intron Name: Anas_platyrhynchos_platyrhynchos_3_13286409_13287206_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13286409 - 13287206

Intron Length:

798

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTATGTTCA

5'SS Class:

major

3'SS Sequence:

TTTTTCCTCTTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTCAAT

U12 Branch Point Sequence:

TTTTTTTTTCCT

Flanking Amino Acid:

LEMKCCANLTGGHMVMGDSF

Intron Amino Acid Position:

416

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.6

0.67

70.3

36.5

Major BPS

76.9

0.67

1.2

31.9

Major PPT

85.9

0.81

0.6

85.6

21.5

Minor 5ss

46.1

-0.4

2.4

50.4

Minor BPS

45.5

-0.2

3.6

82.93

38.6

Associated Gene:

Gene:

SEC23B

Ensembl Gene ID:

ENSAPLG00000004406

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027025

13280477 - 13294874

14398

ENSAPLT00000004619

13280477 - 13295622

15146