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Intron Name: Anas_platyrhynchos_platyrhynchos_3_13287894_13288237_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13287894 - 13288237

Intron Length:

344

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTAAGTTTC

5'SS Class:

strong_major

3'SS Sequence:

CAATTCTGTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAA

U12 Branch Point Sequence:

TTCTTTTCAATT

Flanking Amino Acid:

NAKGPCVSENELGIGGTSQW

Intron Amino Acid Position:

485

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.8

0.84

84.3

27.2

Major BPS

90.8

1.01

0.7

91.9

19.6

Major PPT

71.2

0.48

65.5

40.5

Minor 5ss

47.2

-0.3

2.8

66.2

38.1

Minor BPS

64.6

0.54

1.5

79.05

Associated Gene:

Gene:

SEC23B

Ensembl Gene ID:

ENSAPLG00000004406

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027025

13280477 - 13294874

14398

ENSAPLT00000004619

13280477 - 13295622

15146