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Intron Name: Anas_platyrhynchos_platyrhynchos_3_13288328_13288815_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13288328 - 13288815

Intron Length:

488

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCAGCCCT

5'SS Class:

major

3'SS Sequence:

ATTTCATTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTCAT

U12 Branch Point Sequence:

CTTACCTTATTT

Flanking Amino Acid:

LAIYFEVVNQHNAPIPQGGR

Intron Amino Acid Position:

515

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.6

0.56

1.3

66.3

45.2

Major BPS

91.2

1.02

0.7

91.7

20.2

Major PPT

84.2

0.77

0.8

78.1

34.6

Minor 5ss

35.9

-1.6

49.4

46.4

Minor BPS

65.8

0.58

1.7

80.47

41.8

Associated Gene:

Gene:

SEC23B

Ensembl Gene ID:

ENSAPLG00000004406

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027025

13280477 - 13294874

14398

ENSAPLT00000004619

13280477 - 13295622

15146