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Intron Name: Anas_platyrhynchos_platyrhynchos_3_13288923_13289098_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13288923 - 13289098

Intron Length:

176

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTGAGTATC

5'SS Class:

strong_major

3'SS Sequence:

ACTAATCCTTCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTAAT

U12 Branch Point Sequence:

TAACCCTTTACT

Flanking Amino Acid:

KRIRVTTIARNWADAQSQLQ

Intron Amino Acid Position:

550

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.8

0.9

84.1

26.4

Major BPS

86.7

0.91

0.7

84.2

21.8

Major PPT

71.8

0.49

0.9

66.8

39.5

Minor 5ss

36.6

-1.5

2.9

46.1

36.1

Minor BPS

67.2

0.62

1.6

80.03

41.2

Associated Gene:

Gene:

SEC23B

Ensembl Gene ID:

ENSAPLG00000004406

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027025

13280477 - 13294874

14398

ENSAPLT00000004619

13280477 - 13295622

15146