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Intron Name: Anas_platyrhynchos_platyrhynchos_3_13289253_13290635_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13289253 - 13290635

Intron Length:

1383

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGACCA

5'SS Class:

strong_major

3'SS Sequence:

TTGCTTCCTACAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATACAT

U12 Branch Point Sequence:

TATAACCAAAGT

Flanking Amino Acid:

RWLDRQLIRLCQKFGQYNKD

Intron Amino Acid Position:

602

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.6

0.74

38.2

Major BPS

74.9

0.62

81.3

29.9

Major PPT

82.6

0.73

0.8

76.8

Minor 5ss

32.4

-2

37.8

40.6

Minor BPS

41.7

-0.5

2.3

63.87

45.5

Associated Gene:

Gene:

SEC23B

Ensembl Gene ID:

ENSAPLG00000004406

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027025

13280477 - 13294874

14398

ENSAPLT00000004619

13280477 - 13295622

15146